Task 97950760

Name ebola_RdRp_v1_sidock_00259331_r1_s-24.0_0
Workunit 68579337
Created 11 Dec 2025, 22:35:09 UTC
Sent 16 Dec 2025, 5:22:57 UTC
Report deadline 20 Dec 2025, 5:22:57 UTC
Received 17 Dec 2025, 3:00:45 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 79764
Run time 6 hours 5 min 25 sec
CPU time 6 hours 5 min 1 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 9.72 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.99 MB
Peak swap size 247.79 MB
Peak disk usage 20.24 MB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:15:20 (112123): wrapper (7.17.26016): starting
00:15:20 (112123): wrapper (7.17.26016): starting
00:15:20 (112123): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/28/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d82f6c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7545a1c45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7545a1c9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7545a1c4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7545a1c288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7545a1c297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7545a1ca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7545a1cab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7545a1caddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d82f6c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d82f6c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7545a1c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7545a1cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7545a1cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x7545a1d0ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5d82f6c51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d82f6c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7545a1c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7545a1c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d82f6c1aa3a]

Exiting...
10:15:02 (189008): wrapper (7.17.26016): starting
10:15:02 (189008): wrapper (7.17.26016): starting
10:15:02 (189008): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/28/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:40:00 (1933): wrapper (7.17.26016): starting
18:40:00 (1933): wrapper (7.17.26016): starting
18:40:00 (1933): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/28/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:02 (21087): wrapper (7.17.26016): starting
21:00:02 (21087): wrapper (7.17.26016): starting
21:00:02 (21087): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/28/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:00:09 (21087): cmdock exited; CPU time 6.034501
21:00:09 (21087): called boinc_finish(0)

</stderr_txt>
]]>


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