Task 97945968

Name ebola_RdRp_v1_sidock_00258130_r1_s-24.0_0
Workunit 68574533
Created 11 Dec 2025, 22:31:07 UTC
Sent 15 Dec 2025, 23:13:27 UTC
Report deadline 19 Dec 2025, 23:13:27 UTC
Received 17 Dec 2025, 6:12:27 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 48053
Run time 20 hours 25 min 45 sec
CPU time 20 hours 17 min 57 sec
Validate state Valid
Credit 721.64
Device peak FLOPS 6.84 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.75 MB
Peak swap size 247.71 MB
Peak disk usage 20.19 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
16:40:06 (4096575): wrapper (7.17.26016): starting
16:40:06 (4096575): wrapper (7.17.26016): starting
16:40:06 (4096575): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x58e74243ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x72f134242520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x72f1342969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x72f134242476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x72f1342287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x72f134289677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x72f1342a0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x72f1342a2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x72f1342a5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x58e74245c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x58e74247b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x72f134242520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x72f1342e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x72f1342ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x72f13431bf9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x58e742451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x58e74241e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x72f134229d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x72f134229e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x58e74241aa3a]

Exiting...
07:21:59 (5139): wrapper (7.17.26016): starting
07:21:59 (5139): wrapper (7.17.26016): starting
07:21:59 (5139): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:42:15 (5139): cmdock exited; CPU time 33435.207400
16:42:15 (5139): called boinc_finish(0)

</stderr_txt>
]]>


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