Task 97209947

Name ebola_RdRp_v1_sidock_00091274_r2_s-24.0_0
Workunit 67907110
Created 9 Nov 2025, 16:38:50 UTC
Sent 11 Nov 2025, 4:02:54 UTC
Report deadline 15 Nov 2025, 4:02:54 UTC
Received 12 Nov 2025, 3:14:43 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 50710
Run time 9 hours 37 min 46 sec
CPU time 9 hours 37 min 46 sec
Validate state Valid
Credit 444.39
Device peak FLOPS 7.59 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.13 MB
Peak swap size 247.45 MB
Peak disk usage 19.99 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
05:03:38 (98394): wrapper (7.17.26016): starting
05:03:38 (98394): wrapper (7.17.26016): starting
05:03:38 (98394): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x558c8fe3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcde6666520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7fcde66ba9fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7fcde6666476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fcde664c7f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x7fcde66ad677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x7fcde66c4cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x7fcde66c6a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x7fcde66c9453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x558c8fe5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x558c8fe7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcde6666520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fcde67097f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fcde670e677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fcde673ff9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x558c8fe51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x558c8fe1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fcde664dd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fcde664de40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x558c8fe1aa3a]

Exiting...
22:00:00 (6926): wrapper (7.17.26016): starting
22:00:01 (6926): wrapper (7.17.26016): starting
22:00:01 (6926): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:14:24 (6926): cmdock exited; CPU time 20257.642466
04:14:24 (6926): called boinc_finish(0)

</stderr_txt>
]]>


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