Task 97185485

Name ebola_RdRp_v1_sidock_00085178_r1_s-24.0_0
Workunit 67882725
Created 9 Nov 2025, 16:18:17 UTC
Sent 10 Nov 2025, 8:37:58 UTC
Report deadline 14 Nov 2025, 8:37:58 UTC
Received 11 Nov 2025, 11:30:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 78592
Run time 11 hours 6 min 14 sec
CPU time 11 hours 6 min 14 sec
Validate state Valid
Credit 365.64
Device peak FLOPS 7.88 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.83 MB
Peak swap size 247.18 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
11:47:34 (39062): wrapper (7.17.26016): starting
11:47:34 (39062): wrapper (7.17.26016): starting
11:47:34 (39062): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6289b783ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x733302c45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x733302c9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x733302c4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x733302c288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x733302c297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x733302ca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x733302cab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x733302caddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6289b785c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6289b787b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x733302c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x733302cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x733302cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x733302d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6289b7851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6289b781e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x733302c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x733302c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6289b781aa3a]

Exiting...
21:00:02 (110619): wrapper (7.17.26016): starting
21:00:02 (110619): wrapper (7.17.26016): starting
21:00:02 (110619): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/27/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:30:46 (110619): cmdock exited; CPU time 27855.891802
05:30:46 (110619): called boinc_finish(0)

</stderr_txt>
]]>


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