Task 97166467

Name	ebola_RdRp_v1_sidock_00080423_r4_s-24.0_0
Workunit	67863708
Created	9 Nov 2025, 16:01:37 UTC
Sent	9 Nov 2025, 18:03:10 UTC
Report deadline	13 Nov 2025, 18:03:10 UTC
Received	11 Nov 2025, 18:00:53 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54533
Run time	15 hours 35 min 35 sec
CPU time	15 hours 29 min 33 sec
Validate state	Valid
Credit	468.32
Device peak FLOPS	5.46 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.01 MB
Peak swap size	246.52 MB
Peak disk usage	20.15 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:59:52 (31204): wrapper (7.17.26016): starting
14:59:52 (31204): wrapper (7.17.26016): starting
14:59:52 (31204): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:00:00 (14078): wrapper (7.17.26016): starting
06:00:00 (14078): wrapper (7.17.26016): starting
06:00:00 (14078): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x564b7ce3ff8c]
/lib64/libc.so.6(+0x3ebf0)[0x7f9a7f03ebf0]
/lib64/libc.so.6(+0x8bedc)[0x7f9a7f08bedc]
/lib64/libc.so.6(raise+0x16)[0x7f9a7f03eb46]
/lib64/libc.so.6(abort+0xd3)[0x7f9a7f028833]
/lib64/libc.so.6(+0x29172)[0x7f9a7f029172]
/lib64/libc.so.6(+0x95f87)[0x7f9a7f095f87]
/lib64/libc.so.6(+0x9783c)[0x7f9a7f09783c]
/lib64/libc.so.6(free+0x55)[0x7f9a7f09a2c5]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x564b7ce5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x564b7ce7b8e4]
/lib64/libc.so.6(+0x3ebf0)[0x7f9a7f03ebf0]
/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f9a7f0d4655]
/lib64/libc.so.6(__nanosleep+0x17)[0x7f9a7f0d9107]
/lib64/libc.so.6(usleep+0x49)[0x7f9a7f104fe9]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x564b7ce51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x564b7ce1e784]
/lib64/libc.so.6(+0x295d0)[0x7f9a7f0295d0]
/lib64/libc.so.6(__libc_start_main+0x80)[0x7f9a7f029680]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x564b7ce1aa3a]

Exiting...
10:40:15 (4758): wrapper (7.17.26016): starting
10:40:15 (4758): wrapper (7.17.26016): starting
10:40:15 (4758): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
12:32:02 (20668): wrapper (7.17.26016): starting
12:32:02 (20668): wrapper (7.17.26016): starting
12:32:02 (20668): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
06:00:00 (22149): wrapper (7.17.26016): starting
06:00:00 (22149): wrapper (7.17.26016): starting
06:00:00 (22149): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
09:30:24 (470757): wrapper (7.17.26016): starting
09:30:24 (470757): wrapper (7.17.26016): starting
09:30:24 (470757): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56166ea3ff8c]
/lib64/libc.so.6(+0x3fc30)[0x7f0d4ce3fc30]
/lib64/libc.so.6(+0x8d02c)[0x7f0d4ce8d02c]
/lib64/libc.so.6(raise+0x16)[0x7f0d4ce3fb86]
/lib64/libc.so.6(abort+0xd3)[0x7f0d4ce29873]
/lib64/libc.so.6(+0x2a1b2)[0x7f0d4ce2a1b2]
/lib64/libc.so.6(+0x970d7)[0x7f0d4ce970d7]
/lib64/libc.so.6(+0x9898c)[0x7f0d4ce9898c]
/lib64/libc.so.6(free+0x55)[0x7f0d4ce9b415]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56166ea5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56166ea7b8e4]
/lib64/libc.so.6(+0x3fc30)[0x7f0d4ce3fc30]
/lib64/libc.so.6(clock_nanosleep+0x65)[0x7f0d4ced5795]
/lib64/libc.so.6(__nanosleep+0x17)[0x7f0d4ceda387]
/lib64/libc.so.6(usleep+0x49)[0x7f0d4cf06319]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x56166ea51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56166ea1e784]
/lib64/libc.so.6(+0x2a610)[0x7f0d4ce2a610]
/lib64/libc.so.6(__libc_start_main+0x80)[0x7f0d4ce2a6c0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56166ea1aa3a]

Exiting...
11:31:56 (10693): wrapper (7.17.26016): starting
11:31:56 (10693): wrapper (7.17.26016): starting
11:31:56 (10693): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:00:42 (10693): cmdock exited; CPU time 4495.835814
13:00:42 (10693): called boinc_finish(0)

</stderr_txt>
]]>