Task 97164385

Name ebola_RdRp_v1_sidock_00057517_r1_s-24.0_1
Workunit 67772081
Created 9 Nov 2025, 12:43:29 UTC
Sent 9 Nov 2025, 16:20:45 UTC
Report deadline 13 Nov 2025, 16:20:45 UTC
Received 10 Nov 2025, 10:18:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 31429
Run time 10 hours 38 min 28 sec
CPU time 10 hours 38 min 20 sec
Validate state Valid
Credit 506.82
Device peak FLOPS 6.08 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.76 MB
Peak swap size 247.60 MB
Peak disk usage 19.98 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
18:32:36 (2795928): wrapper (7.17.26016): starting
18:32:36 (2795928): wrapper (7.17.26016): starting
18:32:36 (2795928): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x59ba6aa3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x74b983c45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x74b983cadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x59ba6aa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x59ba6aa7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x74b983c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x74b983cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x74b983cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x74b983d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x59ba6aa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x59ba6aa1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x74b983c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x74b983c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x59ba6aa1aa3a]

Exiting...
20:47:02 (3616): wrapper (7.17.26016): starting
20:47:02 (3616): wrapper (7.17.26016): starting
20:47:02 (3616): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
05:18:38 (3616): cmdock exited; CPU time 30552.128456
05:18:38 (3616): called boinc_finish(0)

</stderr_txt>
]]>


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