Task 97164370

Name ebola_RdRp_v1_sidock_00057432_r2_s-24.0_1
Workunit 67771742
Created 9 Nov 2025, 12:24:48 UTC
Sent 9 Nov 2025, 16:20:45 UTC
Report deadline 13 Nov 2025, 16:20:45 UTC
Received 10 Nov 2025, 7:33:12 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 31429
Run time 10 hours 31 min 5 sec
CPU time 10 hours 30 min 55 sec
Validate state Valid
Credit 506.24
Device peak FLOPS 6.08 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.88 MB
Peak swap size 247.18 MB
Peak disk usage 19.98 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
15:55:55 (2759180): wrapper (7.17.26016): starting
15:55:55 (2759180): wrapper (7.17.26016): starting
15:55:55 (2759180): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x63896283ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70bb88445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x70bb8849eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x70bb8844527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x70bb884288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x70bb884297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x70bb884a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x70bb884ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x70bb884addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x63896285c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x63896287b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x70bb88445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x70bb884ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x70bb884f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x70bb8852975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x638962851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x63896281e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x70bb8842a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x70bb8842a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x63896281aa3a]

Exiting...
20:47:02 (3608): wrapper (7.17.26016): starting
20:47:02 (3608): wrapper (7.17.26016): starting
20:47:02 (3608): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:33:00 (3608): cmdock exited; CPU time 20642.492302
02:33:00 (3608): called boinc_finish(0)

</stderr_txt>
]]>


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