Task 97162154

Name ebola_RdRp_v1_sidock_00050940_r4_s-24.0_1
Workunit 67745776
Created 8 Nov 2025, 9:29:08 UTC
Sent 9 Nov 2025, 14:46:56 UTC
Report deadline 13 Nov 2025, 14:46:56 UTC
Received 10 Nov 2025, 14:08:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 77675
Run time 11 hours 54 min 59 sec
CPU time 10 hours 36 min 40 sec
Validate state Valid
Credit 510.28
Device peak FLOPS 8.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 236.82 MB
Peak swap size 247.50 MB
Peak disk usage 20.07 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:17:11 (14281): wrapper (7.17.26016): starting
16:17:11 (14281): wrapper (7.17.26016): starting
16:17:11 (14281): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55b39003ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6322c4bdf0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7f6322caf262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55b39005c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55b39007b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7f6322c4bdf0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7f6322ca69ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7f6322c9b668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7f6322ce7f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7f6322cf3393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7f6322d1c373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55b390051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55b39001e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7f6322c35ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7f6322c35d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55b39001aa3a]

Exiting...
11:31:46 (2936): wrapper (7.17.26016): starting
11:31:46 (2936): wrapper (7.17.26016): starting
11:31:46 (2936): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
15:08:22 (2936): cmdock exited; CPU time 12217.562897
15:08:22 (2936): called boinc_finish(0)

</stderr_txt>
]]>


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