Task 97161162

Name	ebola_RdRp_v1_sidock_00050054_r2_s-24.0_1
Workunit	67742230
Created	8 Nov 2025, 7:40:33 UTC
Sent	9 Nov 2025, 13:57:36 UTC
Report deadline	13 Nov 2025, 13:57:36 UTC
Received	11 Nov 2025, 16:14:21 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	40324
Run time	13 hours 32 min 13 sec
CPU time	13 hours 29 min 24 sec
Validate state	Valid
Credit	536.44
Device peak FLOPS	5.51 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.92 MB
Peak swap size	247.10 MB
Peak disk usage	20.04 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
00:00:30 (17464): wrapper (7.17.26016): starting
00:00:30 (17464): wrapper (7.17.26016): starting
00:00:30 (17464): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55c67623ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fda19963420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fda197f76f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55c67625c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55c67627b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fda197a0090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fda1983a23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fda1983fec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fda19872a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55c676251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55c67621e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fda19781083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55c67621aa3a]

Exiting...
11:52:50 (2658): wrapper (7.17.26016): starting
11:52:50 (2658): wrapper (7.17.26016): starting
11:52:50 (2658): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x559df963ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fae54a38420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fae548cc6f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x559df965c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x559df967b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fae54875090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fae5490f23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fae54914ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fae54947a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x559df9651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x559df961e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fae54856083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x559df961aa3a]

Exiting...
11:56:07 (1909): wrapper (7.17.26016): starting
11:56:07 (1909): wrapper (7.17.26016): starting
11:56:07 (1909): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55c5fac3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f1dc89b4420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f1dc88486f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55c5fac5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55c5fac7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f1dc87f1090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f1dc888b23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f1dc8890ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f1dc88c3a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55c5fac51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55c5fac1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f1dc87d2083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55c5fac1aa3a]

Exiting...
16:11:39 (1900): wrapper (7.17.26016): starting
16:11:39 (1900): wrapper (7.17.26016): starting
16:11:39 (1900): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:14:05 (1900): cmdock exited; CPU time 8171.604823
19:14:05 (1900): called boinc_finish(0)

</stderr_txt>
]]>