Task 97160673

Name ebola_RdRp_v1_sidock_00070968_r4_s-24.0_1
Workunit 67825888
Created 8 Nov 2025, 3:03:14 UTC
Sent 9 Nov 2025, 13:36:07 UTC
Report deadline 13 Nov 2025, 13:36:07 UTC
Received 10 Nov 2025, 15:22:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 77675
Run time 12 hours 8 min 10 sec
CPU time 10 hours 45 min 39 sec
Validate state Valid
Credit 517.70
Device peak FLOPS 8.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.99 MB
Peak swap size 247.53 MB
Peak disk usage 20.01 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:08:59 (12357): wrapper (7.17.26016): starting
15:08:59 (12357): wrapper (7.17.26016): starting
15:08:59 (12357): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x56268683ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fc9786f6df0]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x22) [0x7fc97875a262]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x56268685c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x56268687b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3fdf0) [0x7fc9786f6df0]
/lib/x86_64-linux-gnu/libc.so.6(+0x9a9ee) [0x7fc9787519ee]
/lib/x86_64-linux-gnu/libc.so.6(+0x8f668) [0x7fc978746668]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x2a) [0x7fc978792f7a]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13) [0x7fc97879e393]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x43) [0x7fc9787c7373]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x562686851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x56268681e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29ca8) [0x7fc9786e0ca8]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85) [0x7fc9786e0d65]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x56268681aa3a]

Exiting...
11:31:46 (2935): wrapper (7.17.26016): starting
11:31:46 (2935): wrapper (7.17.26016): starting
11:31:46 (2935): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:42:14 (173647): wrapper (7.17.26016): starting
14:42:14 (173647): wrapper (7.17.26016): starting
14:42:14 (173647): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
16:22:47 (173647): cmdock exited; CPU time 5705.124682
16:22:47 (173647): called boinc_finish(0)

</stderr_txt>
]]>


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