Task 97160281

Name ebola_RdRp_v1_sidock_00048085_r3_s-24.0_1
Workunit 67734355
Created 7 Nov 2025, 22:35:39 UTC
Sent 9 Nov 2025, 13:18:38 UTC
Report deadline 13 Nov 2025, 13:18:38 UTC
Received 10 Nov 2025, 18:40:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 59009
Run time 9 hours 1 min 47 sec
CPU time 8 hours 40 min 19 sec
Validate state Valid
Credit 622.67
Device peak FLOPS 9.35 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.02 MB
Peak swap size 248.02 MB
Peak disk usage 20.14 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:50:36 (536366): wrapper (7.17.26016): starting
15:50:36 (536366): wrapper (7.17.26016): starting
15:50:36 (536366): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/22/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64cf0fc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d4e4e045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7d4e4e09eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7d4e4e04527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7d4e4e0288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7d4e4e0297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7d4e4e0a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7d4e4e0ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7d4e4e0addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64cf0fc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64cf0fc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d4e4e045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d4e4e0ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d4e4e0f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d4e4e12975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x64cf0fc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64cf0fc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d4e4e02a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d4e4e02a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64cf0fc1aa3a]

Exiting...
16:59:35 (5445): wrapper (7.17.26016): starting
16:59:36 (5445): wrapper (7.17.26016): starting
16:59:36 (5445): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/22/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:40:23 (5445): cmdock exited; CPU time 9200.887796
19:40:23 (5445): called boinc_finish(0)

</stderr_txt>
]]>


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