Task 97157532

Name ebola_RdRp_v1_sidock_00040595_r2_s-24.0_1
Workunit 67704394
Created 6 Nov 2025, 13:05:44 UTC
Sent 9 Nov 2025, 11:43:32 UTC
Report deadline 13 Nov 2025, 11:43:32 UTC
Received 10 Nov 2025, 8:00:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54588
Run time 8 hours 3 min 4 sec
CPU time 8 hours 2 min 7 sec
Validate state Valid
Credit 483.40
Device peak FLOPS 9.64 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.81 MB
Peak swap size 246.71 MB
Peak disk usage 20.09 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:59:34 (407100): wrapper (7.17.26016): starting
10:59:34 (407100): wrapper (7.17.26016): starting
10:59:34 (407100): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5f533d63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x730bc1a45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x730bc1a9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x730bc1a4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x730bc1a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x730bc1a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x730bc1aa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x730bc1aab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x730bc1aaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5f533d65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5f533d67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x730bc1a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x730bc1aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x730bc1af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x730bc1b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5f533d651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5f533d61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x730bc1a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x730bc1a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5f533d61aa3a]

Exiting...
21:00:34 (482743): wrapper (7.17.26016): starting
21:00:35 (482743): wrapper (7.17.26016): starting
21:00:35 (482743): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/14/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:59:54 (482743): cmdock exited; CPU time 17940.869532
01:59:54 (482743): called boinc_finish(0)

</stderr_txt>
]]>


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