Task 97157250

Name	ebola_RdRp_v1_sidock_00061663_r2_s-24.0_1
Workunit	67788666
Created	6 Nov 2025, 11:32:49 UTC
Sent	9 Nov 2025, 11:28:53 UTC
Report deadline	13 Nov 2025, 11:28:53 UTC
Received	10 Nov 2025, 6:48:01 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	9 hours 4 min 25 sec
CPU time	9 hours 3 min 27 sec
Validate state	Valid
Credit	535.26
Device peak FLOPS	9.64 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.23 MB
Peak swap size	247.47 MB
Peak disk usage	20.06 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:22:43 (371836): wrapper (7.17.26016): starting
06:22:43 (371836): wrapper (7.17.26016): starting
06:22:43 (371836): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55b3a243ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75e445645330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75e44569eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75e44564527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75e4456288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75e4456297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75e4456a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75e4456ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75e4456addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55b3a245c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55b3a247b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75e445645330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75e4456ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75e4456f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75e44572975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55b3a2451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55b3a241e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75e44562a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75e44562a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55b3a241aa3a]

Exiting...
09:50:02 (398594): wrapper (7.17.26016): starting
09:50:03 (398594): wrapper (7.17.26016): starting
09:50:03 (398594): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x602b6bc3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x714852445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x71485249eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x71485244527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7148524288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7148524297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7148524a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7148524ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7148524addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x602b6bc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x602b6bc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x714852445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7148524ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7148524f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71485252975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x602b6bc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x602b6bc1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71485242a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71485242a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x602b6bc1aa3a]

Exiting...
21:00:34 (482739): wrapper (7.17.26016): starting
21:00:35 (482739): wrapper (7.17.26016): starting
21:00:35 (482739): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:47:51 (482739): cmdock exited; CPU time 13624.233607
00:47:51 (482739): called boinc_finish(0)

</stderr_txt>
]]>