Task 97156943

Name	ebola_RdRp_v1_sidock_00031087_r2_s-24.0_2
Workunit	67666362
Created	6 Nov 2025, 7:31:53 UTC
Sent	9 Nov 2025, 11:19:43 UTC
Report deadline	13 Nov 2025, 11:19:43 UTC
Received	10 Nov 2025, 3:41:14 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	6 hours 47 min 53 sec
CPU time	6 hours 46 min 44 sec
Validate state	Valid
Credit	388.32
Device peak FLOPS	9.64 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	237.94 MB
Peak swap size	244.71 MB
Peak disk usage	20.01 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:58:54 (368597): wrapper (7.17.26016): starting
05:58:54 (368597): wrapper (7.17.26016): starting
05:58:54 (368597): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6156e923ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c77b6c45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7c77b6c9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7c77b6c4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7c77b6c288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7c77b6c297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7c77b6ca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7c77b6cab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7c77b6caddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6156e925c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6156e927b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7c77b6c45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7c77b6cecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7c77b6cf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7c77b6d2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6156e9251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6156e921e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7c77b6c2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7c77b6c2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6156e921aa3a]

Exiting...
09:50:02 (398593): wrapper (7.17.26016): starting
09:50:03 (398593): wrapper (7.17.26016): starting
09:50:03 (398593): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x578de4c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f11fca45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7f11fca9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7f11fca4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7f11fca288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7f11fca297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7f11fcaa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7f11fcaab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7f11fcaaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x578de4c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x578de4c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f11fca45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7f11fcaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f11fcaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7f11fcb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x578de4c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x578de4c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f11fca2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f11fca2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x578de4c1aa3a]

Exiting...
21:00:34 (482738): wrapper (7.17.26016): starting
21:00:35 (482738): wrapper (7.17.26016): starting
21:00:35 (482738): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:41:03 (482738): cmdock exited; CPU time 2424.952936
21:41:03 (482738): called boinc_finish(0)

</stderr_txt>
]]>