Task 97156508

Name	ebola_RdRp_v1_sidock_00079946_r4_s-24.0_0
Workunit	67861800
Created	6 Nov 2025, 3:38:46 UTC
Sent	9 Nov 2025, 11:01:02 UTC
Report deadline	13 Nov 2025, 11:01:02 UTC
Received	10 Nov 2025, 4:34:43 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	7 hours 54 min 31 sec
CPU time	7 hours 53 min 33 sec
Validate state	Valid
Credit	442.62
Device peak FLOPS	9.64 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.00 MB
Peak swap size	247.36 MB
Peak disk usage	19.98 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:46:24 (367075): wrapper (7.17.26016): starting
05:46:24 (367075): wrapper (7.17.26016): starting
05:46:24 (367075): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x58404303ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72a594045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x72a59409eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x72a59404527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x72a5940288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x72a5940297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x72a5940a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x72a5940ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x72a5940addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x58404305c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x58404307b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x72a594045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x72a5940ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x72a5940f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x72a59412975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x584043051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x58404301e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x72a59402a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x72a59402a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x58404301aa3a]

Exiting...
09:50:02 (398592): wrapper (7.17.26016): starting
09:50:03 (398592): wrapper (7.17.26016): starting
09:50:03 (398592): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x6072d383ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x716ec1045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x716ec109eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x716ec104527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x716ec10288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x716ec10297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x716ec10a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x716ec10ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x716ec10addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x6072d385c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x6072d387b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x716ec1045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x716ec10ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x716ec10f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x716ec112975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x6072d3851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x6072d381e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x716ec102a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x716ec102a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x6072d381aa3a]

Exiting...
21:00:34 (482737): wrapper (7.17.26016): starting
21:00:35 (482737): wrapper (7.17.26016): starting
21:00:35 (482737): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/11/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:34:32 (482737): cmdock exited; CPU time 5633.248467
22:34:32 (482737): called boinc_finish(0)

</stderr_txt>
]]>