Task 97156192

Name	ebola_RdRp_v1_sidock_00079868_r3_s-24.0_0
Workunit	67861487
Created	6 Nov 2025, 3:38:33 UTC
Sent	9 Nov 2025, 10:37:29 UTC
Report deadline	13 Nov 2025, 10:37:29 UTC
Received	10 Nov 2025, 4:29:39 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54588
Run time	8 hours 3 min 24 sec
CPU time	8 hours 2 min 6 sec
Validate state	Valid
Credit	448.06
Device peak FLOPS	9.64 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.19 MB
Peak swap size	247.02 MB
Peak disk usage	20.12 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
05:32:03 (365335): wrapper (7.17.26016): starting
05:32:03 (365335): wrapper (7.17.26016): starting
05:32:03 (365335): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62c02ee3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x734213e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x734213e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x734213e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x734213e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x734213e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x734213ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x734213eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x734213eaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62c02ee5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62c02ee7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x734213e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x734213eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x734213ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x734213f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62c02ee51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62c02ee1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x734213e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x734213e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62c02ee1aa3a]

Exiting...
09:50:02 (398591): wrapper (7.17.26016): starting
09:50:03 (398591): wrapper (7.17.26016): starting
09:50:03 (398591): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5a1acfa3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d8d17e45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7d8d17e9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7d8d17e4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7d8d17e288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7d8d17e297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7d8d17ea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7d8d17eab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7d8d17eaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5a1acfa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5a1acfa7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7d8d17e45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7d8d17eecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7d8d17ef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7d8d17f2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5a1acfa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5a1acfa1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7d8d17e2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7d8d17e2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5a1acfa1aa3a]

Exiting...
21:00:34 (482736): wrapper (7.17.26016): starting
21:00:35 (482736): wrapper (7.17.26016): starting
21:00:35 (482736): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:29:26 (482736): cmdock exited; CPU time 5322.381493
22:29:26 (482736): called boinc_finish(0)

</stderr_txt>
]]>