Task 97132207

Name ebola_RdRp_v1_sidock_00073880_r1_s-24.0_0
Workunit 67837533
Created 6 Nov 2025, 3:18:35 UTC
Sent 8 Nov 2025, 12:27:19 UTC
Report deadline 12 Nov 2025, 12:27:19 UTC
Received 9 Nov 2025, 10:59:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 20 min 10 sec
CPU time 8 hours 19 min 31 sec
Validate state Valid
Credit 484.21
Device peak FLOPS 9.26 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.28 MB
Peak swap size 247.45 MB
Peak disk usage 20.10 MB

Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
10:36:57 (42307): wrapper (7.17.26016): starting
10:36:57 (42307): wrapper (7.17.26016): starting
10:36:57 (42307): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/24/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5adb1843ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fed3ce45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7fed3ce9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7fed3ce4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7fed3ce288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7fed3ce297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7fed3cea8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7fed3ceab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7fed3ceaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5adb1845c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5adb1847b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fed3ce45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7fed3ceecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fed3cef9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7fed3cf2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5adb18451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5adb1841e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fed3ce2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fed3ce2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5adb1841aa3a]

Exiting...
22:33:21 (128752): wrapper (7.17.26016): starting
22:33:21 (128752): wrapper (7.17.26016): starting
22:33:21 (128752): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/24/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:59:16 (128752): cmdock exited; CPU time 16800.773862
04:59:16 (128752): called boinc_finish(0)

</stderr_txt>
]]>


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