Task 97131932

Name ebola_RdRp_v1_sidock_00073811_r3_s-24.0_0
Workunit 67837259
Created 6 Nov 2025, 3:18:23 UTC
Sent 8 Nov 2025, 12:09:00 UTC
Report deadline 12 Nov 2025, 12:09:00 UTC
Received 9 Nov 2025, 10:16:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 12 min 10 sec
CPU time 8 hours 11 min 24 sec
Validate state Valid
Credit 475.52
Device peak FLOPS 9.26 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.23 MB
Peak swap size 247.47 MB
Peak disk usage 20.06 MB

Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
10:26:27 (41062): wrapper (7.17.26016): starting
10:26:27 (41062): wrapper (7.17.26016): starting
10:26:27 (41062): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d3d7123ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7343cec45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7343cec9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7343cec4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7343cec288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7343cec297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7343ceca8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7343cecab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7343cecaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d3d7125c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d3d7127b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7343cec45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7343cececadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7343cecf9a27]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x43)[0x7343ced0ec93]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5d3d71251a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d3d7121e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7343cec2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7343cec2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d3d7121aa3a]

Exiting...
22:24:44 (127743): wrapper (7.17.26016): starting
22:24:44 (127743): wrapper (7.17.26016): starting
22:24:44 (127743): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:16:44 (127743): cmdock exited; CPU time 15292.051834
04:16:44 (127743): called boinc_finish(0)

</stderr_txt>
]]>


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