Task 97130521

Name ebola_RdRp_v1_sidock_00073466_r2_s-24.0_0
Workunit 67835878
Created 6 Nov 2025, 3:16:42 UTC
Sent 8 Nov 2025, 10:51:59 UTC
Report deadline 12 Nov 2025, 10:51:59 UTC
Received 9 Nov 2025, 8:05:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 15 min 27 sec
CPU time 8 hours 14 min 44 sec
Validate state Valid
Credit 478.32
Device peak FLOPS 9.26 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.23 MB
Peak swap size 247.18 MB
Peak disk usage 20.06 MB

Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
10:22:28 (40577): wrapper (7.17.26016): starting
10:22:28 (40577): wrapper (7.17.26016): starting
10:22:28 (40577): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c13ac03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78cf02a45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x78cf02a9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x78cf02a4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x78cf02a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x78cf02a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x78cf02aa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x78cf02aab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x78cf02aaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c13ac05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c13ac07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x78cf02a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x78cf02aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x78cf02af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x78cf02b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c13ac051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c13ac01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x78cf02a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x78cf02a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c13ac01aa3a]

Exiting...
21:56:31 (124418): wrapper (7.17.26016): starting
21:56:31 (124418): wrapper (7.17.26016): starting
21:56:31 (124418): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/6/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:05:23 (124418): cmdock exited; CPU time 14922.796707
02:05:23 (124418): called boinc_finish(0)

</stderr_txt>
]]>


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