Task 97130476

Name ebola_RdRp_v1_sidock_00073455_r2_s-24.0_0
Workunit 67835834
Created 6 Nov 2025, 3:16:39 UTC
Sent 8 Nov 2025, 10:51:32 UTC
Report deadline 12 Nov 2025, 10:51:32 UTC
Received 9 Nov 2025, 8:49:57 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 60430
Run time 8 hours 7 min 20 sec
CPU time 8 hours 6 min 37 sec
Validate state Valid
Credit 476.03
Device peak FLOPS 9.26 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.10 MB
Peak swap size 247.16 MB
Peak disk usage 20.02 MB

Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
10:18:15 (40083): wrapper (7.17.26016): starting
10:18:15 (40083): wrapper (7.17.26016): starting
10:18:15 (40083): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x64673983ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76d03b445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x76d03b49eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x76d03b44527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x76d03b4288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x76d03b4297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x76d03b4a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x76d03b4ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x76d03b4addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x64673985c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x64673987b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x76d03b445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x76d03b4ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x76d03b4f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76d03b52975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x646739851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x64673981e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76d03b42a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76d03b42a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x64673981aa3a]

Exiting...
21:33:54 (121749): wrapper (7.17.26016): starting
21:33:54 (121749): wrapper (7.17.26016): starting
21:33:54 (121749): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/18/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:49:42 (121749): cmdock exited; CPU time 14679.593272
02:49:42 (121749): called boinc_finish(0)

</stderr_txt>
]]>


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