Task 97126980

Name	ebola_RdRp_v1_sidock_00072568_r4_s-24.0_0
Workunit	67832288
Created	6 Nov 2025, 3:13:16 UTC
Sent	8 Nov 2025, 8:10:00 UTC
Report deadline	12 Nov 2025, 8:10:00 UTC
Received	10 Nov 2025, 4:52:34 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	9 hours 36 min 51 sec
CPU time	9 hours 36 min 6 sec
Validate state	Valid
Credit	444.82
Device peak FLOPS	8.60 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	240.21 MB
Peak swap size	247.21 MB
Peak disk usage	19.96 MB
Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:28:44 (1539423): wrapper (7.17.26016): starting
04:28:44 (1539423): wrapper (7.17.26016): starting
04:28:44 (1539423): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x57f92ae3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7944d2845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7944d289eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7944d284527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7944d28288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7944d28297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7944d28a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7944d28ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7944d28addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x57f92ae5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x57f92ae7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7944d2845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7944d28ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7944d28f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7944d292975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x57f92ae51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x57f92ae1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7944d282a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7944d282a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x57f92ae1aa3a]

Exiting...
10:26:09 (1585303): wrapper (7.17.26016): starting
10:26:09 (1585303): wrapper (7.17.26016): starting
10:26:09 (1585303): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5fe4fb43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75b962a45330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x75b962a9eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x75b962a4527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x75b962a288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x75b962a297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x75b962aa8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x75b962aab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x75b962aaddae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5fe4fb45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5fe4fb47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x75b962a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x75b962aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x75b962af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x75b962b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5fe4fb451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5fe4fb41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x75b962a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x75b962a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5fe4fb41aa3a]

Exiting...
12:25:11 (1785185): wrapper (7.17.26016): starting
12:25:12 (1785185): wrapper (7.17.26016): starting
12:25:12 (1785185): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x574188a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b6601045330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7b660109eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7b660104527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7b66010288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7b66010297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7b66010a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7b66010ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7b66010addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x574188a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x574188a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7b6601045330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7b66010ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7b66010f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7b660112975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x574188a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x574188a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7b660102a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7b660102a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x574188a1aa3a]

Exiting...
21:00:02 (1850724): wrapper (7.17.26016): starting
21:00:02 (1850724): wrapper (7.17.26016): starting
21:00:02 (1850724): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/21/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:52:24 (1850724): cmdock exited; CPU time 6740.598130
22:52:24 (1850724): called boinc_finish(0)

</stderr_txt>
]]>