Task 97126733

Name	ebola_RdRp_v1_sidock_00072507_r4_s-24.0_0
Workunit	67832044
Created	6 Nov 2025, 3:13:02 UTC
Sent	8 Nov 2025, 7:52:25 UTC
Report deadline	12 Nov 2025, 7:52:25 UTC
Received	10 Nov 2025, 3:57:11 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	54585
Run time	9 hours 53 min 27 sec
CPU time	9 hours 52 min 40 sec
Validate state	Valid
Credit	464.50
Device peak FLOPS	8.60 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	239.45 MB
Peak swap size	246.90 MB
Peak disk usage	20.00 MB
Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:23:21 (1538771): wrapper (7.17.26016): starting
04:23:21 (1538771): wrapper (7.17.26016): starting
04:23:21 (1538771): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/22/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ae69f43ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7adb67845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7adb6789eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7adb6784527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7adb678288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7adb678297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7adb678a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7adb678ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7adb678addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ae69f45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ae69f47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7adb67845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7adb678ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7adb678f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7adb6792975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ae69f451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ae69f41e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7adb6782a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7adb6782a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ae69f41aa3a]

Exiting...
10:24:36 (1585121): wrapper (7.17.26016): starting
10:24:36 (1585121): wrapper (7.17.26016): starting
10:24:36 (1585121): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/22/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c023b23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fee24845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7fee2489eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7fee2484527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7fee248288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7fee248297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7fee248a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x7fee248ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7fee248addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c023b25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c023b27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fee24845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7fee248ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fee248f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7fee2492975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c023b251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c023b21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fee2482a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fee2482a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c023b21aa3a]

Exiting...
11:23:41 (1776856): wrapper (7.17.26016): starting
11:23:41 (1776856): wrapper (7.17.26016): starting
11:23:41 (1776856): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/22/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5d375e63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x704ba8445330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x704ba849eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x704ba844527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x704ba84288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x704ba84297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x704ba84a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x704ba84ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x704ba84addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5d375e65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5d375e67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x704ba8445330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x704ba84ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x704ba84f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x704ba852975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5d375e651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5d375e61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x704ba842a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x704ba842a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5d375e61aa3a]

Exiting...
21:00:02 (1850723): wrapper (7.17.26016): starting
21:00:02 (1850723): wrapper (7.17.26016): starting
21:00:02 (1850723): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/22/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:56:57 (1850723): cmdock exited; CPU time 3414.023847
21:56:57 (1850723): called boinc_finish(0)

</stderr_txt>
]]>