Task 97059905

Name ebola_RdRp_v1_sidock_00057580_r4_s-24.0_0
Workunit 67772336
Created 2 Nov 2025, 11:38:23 UTC
Sent 6 Nov 2025, 6:13:43 UTC
Report deadline 9 Nov 2025, 12:56:46 UTC
Received 7 Nov 2025, 10:15:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 77533
Run time 12 hours 42 min 24 sec
CPU time 12 hours 23 min 26 sec
Validate state Valid
Credit 578.43
Device peak FLOPS 7.92 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.96 MB
Peak swap size 247.43 MB
Peak disk usage 19.99 MB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
16:20:58 (1104810): wrapper (7.17.26016): starting
16:20:58 (1104810): wrapper (7.17.26016): starting
16:20:58 (1104810): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito-a520m/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c) [0x55de9283ff8c]
/usr/lib/libc.so.6(+0x3e540) [0x7ffb6e43e540]
/usr/lib/libc.so.6(__libc_free+0x17) [0x7ffb6e4a7f47]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd) [0x55de9285c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4) [0x55de9287b8e4]
/usr/lib/libc.so.6(+0x3e540) [0x7ffb6e43e540]
/usr/lib/libc.so.6(+0x9f042) [0x7ffb6e49f042]
/usr/lib/libc.so.6(+0x931ac) [0x7ffb6e4931ac]
/usr/lib/libc.so.6(clock_nanosleep+0x32) [0x7ffb6e4e3c12]
/usr/lib/libc.so.6(nanosleep+0x17) [0x7ffb6e4efc97]
/usr/lib/libc.so.6(usleep+0x4a) [0x7ffb6e51a57a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf) [0x55de92851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784) [0x55de9281e784]
/usr/lib/libc.so.6(+0x27675) [0x7ffb6e427675]
/usr/lib/libc.so.6(__libc_start_main+0x89) [0x7ffb6e427729]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a) [0x55de9281aa3a]

Exiting...
10:28:11 (5706): wrapper (7.17.26016): starting
10:28:11 (5706): wrapper (7.17.26016): starting
10:28:11 (5706): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/ito-a520m/slots/16/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
19:14:53 (5706): cmdock exited; CPU time 24311.561762
19:14:53 (5706): called boinc_finish(0)

</stderr_txt>
]]>


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