Task 97058820

Name ebola_RdRp_v1_sidock_00057309_r4_s-24.0_0
Workunit 67771252
Created 2 Nov 2025, 11:37:25 UTC
Sent 5 Nov 2025, 11:48:33 UTC
Report deadline 9 Nov 2025, 11:48:33 UTC
Received 6 Nov 2025, 14:13:24 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 57716
Run time 47 min 24 sec
CPU time 46 min 57 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.43 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 238.30 MB
Peak swap size 244.25 MB
Peak disk usage 19.94 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
12:48:38 (3643560): wrapper (7.17.26016): starting
12:48:38 (3643560): wrapper (7.17.26016): starting
12:48:38 (3643560): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x559d7c03ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fb468783050]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x1a)[0x7fb4687dfefa]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x559d7c05c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x559d7c07b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fb468783050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fb468816545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7fb46881ae53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7fb468846285]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x559d7c051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x559d7c01e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7fb46876e24a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fb46876e305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x559d7c01aa3a]

Exiting...
20:29:18 (3694819): wrapper (7.17.26016): starting
20:29:19 (3694819): wrapper (7.17.26016): starting
20:29:19 (3694819): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:26:56 (3807411): wrapper (7.17.26016): starting
14:26:56 (3807411): wrapper (7.17.26016): starting
14:26:56 (3807411): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/15/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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