Task 97058641

Name ebola_RdRp_v1_sidock_00057271_r1_s-24.0_0
Workunit 67771097
Created 2 Nov 2025, 11:37:18 UTC
Sent 5 Nov 2025, 11:41:32 UTC
Report deadline 9 Nov 2025, 11:41:32 UTC
Received 6 Nov 2025, 14:13:24 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 57716
Run time 52 min 3 sec
CPU time 51 min 26 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.43 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 237.55 MB
Peak swap size 243.50 MB
Peak disk usage 19.83 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
12:41:41 (3642615): wrapper (7.17.26016): starting
12:41:42 (3642615): wrapper (7.17.26016): starting
12:41:42 (3642615): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x560c6c63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fbe332de050]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x1a)[0x7fbe3333aefa]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x560c6c65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x560c6c67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fbe332de050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fbe33371545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7fbe33375e53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7fbe333a1285]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x560c6c651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x560c6c61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7fbe332c924a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fbe332c9305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x560c6c61aa3a]

Exiting...
20:29:18 (3694817): wrapper (7.17.26016): starting
20:29:19 (3694817): wrapper (7.17.26016): starting
20:29:19 (3694817): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:26:56 (3807410): wrapper (7.17.26016): starting
14:26:56 (3807410): wrapper (7.17.26016): starting
14:26:56 (3807410): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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