Task 97043132

Name ebola_RdRp_v1_sidock_00053391_r1_s-24.0_0
Workunit 67755577
Created 2 Nov 2025, 11:24:24 UTC
Sent 4 Nov 2025, 19:58:26 UTC
Report deadline 8 Nov 2025, 19:58:26 UTC
Received 6 Nov 2025, 19:20:50 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 80676
Run time 27 sec
CPU time
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 34.26 MB
Peak swap size 41.34 MB
Peak disk usage 19.87 MB

Stderr output

<core_client_version>7.24.6</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
11:58:33 (3703071): wrapper (7.17.26016): starting
11:58:34 (3703071): wrapper (7.17.26016): starting
11:58:34 (3703071): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/cellarnoise/BOINC/40005/slots/173/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55da9003ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f7a4ab26520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7f7a4ab893fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c33e)[0x55da9005c33e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55da9007b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f7a4ab26520]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x55da9003aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f7a4ab26520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7f7a4abc97f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7f7a4abce677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f7a4abfff9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55da90051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55da9001e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f7a4ab0dd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f7a4ab0de40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55da9001aa3a]

Exiting...
11:04:30 (228695): wrapper (7.17.26016): starting
11:04:34 (228695): wrapper (7.17.26016): starting
11:04:34 (228695): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/cellarnoise/BOINC/40005/slots/173/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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