Task 97043068

Name ebola_RdRp_v1_sidock_00053375_r1_s-24.0_0
Workunit 67755513
Created 2 Nov 2025, 11:24:21 UTC
Sent 4 Nov 2025, 19:57:21 UTC
Report deadline 8 Nov 2025, 19:57:21 UTC
Received 6 Nov 2025, 19:18:01 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 80676
Run time 26 sec
CPU time
Validate state Invalid
Credit 0.00
Device peak FLOPS 1.00 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 34.26 MB
Peak swap size 41.34 MB
Peak disk usage 19.82 MB

Stderr output

<core_client_version>7.24.6</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
11:57:30 (3702652): wrapper (7.17.26016): starting
11:57:31 (3702652): wrapper (7.17.26016): starting
11:57:31 (3702652): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/cellarnoise/BOINC/40005/slots/116/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (16 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55af3123ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcff05e8520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7fcff064b3fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3a3)[0x55af3125c3a3]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55af3127b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcff05e8520]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x55af3123aec0]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fcff05e8520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7fcff068b7f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7fcff0690677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fcff06c1f9f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55af31251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55af3121e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fcff05cfd90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fcff05cfe40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55af3121aa3a]

Exiting...
11:04:27 (228497): wrapper (7.17.26016): starting
11:04:31 (228497): wrapper (7.17.26016): starting
11:04:31 (228497): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/cellarnoise/BOINC/40005/slots/116/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)

</stderr_txt>
]]>


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