Task 97029198

Name ebola_RdRp_v1_sidock_00049912_r4_s-24.0_0
Workunit 67741664
Created 2 Nov 2025, 11:12:54 UTC
Sent 4 Nov 2025, 7:36:09 UTC
Report deadline 8 Nov 2025, 7:36:09 UTC
Received 5 Nov 2025, 3:50:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 18776
Run time 13 hours 28 min 47 sec
CPU time 13 hours 28 min 33 sec
Validate state Valid
Credit 741.56
Device peak FLOPS 3.29 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.38 MB
Peak swap size 248.07 MB
Peak disk usage 20.15 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
15:17:49 (69031): wrapper (7.17.26016): starting
15:17:50 (69031): wrapper (7.17.26016): starting
15:17:50 (69031): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/roland/boinc/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5945e563ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77c6a2245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x77c6a229eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x77c6a224527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x77c6a22288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x77c6a22297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x77c6a22a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x77c6a22ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x77c6a22addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5945e565c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5945e567b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x77c6a2245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x77c6a22ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x77c6a22f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x77c6a232975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5945e5651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5945e561e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x77c6a222a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x77c6a222a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5945e561aa3a]

Exiting...
21:06:00 (1952): wrapper (7.17.26016): starting
21:06:00 (1952): wrapper (7.17.26016): starting
21:06:00 (1952): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/home/roland/boinc/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
04:49:54 (1952): cmdock exited; CPU time 27826.996714
04:49:54 (1952): called boinc_finish(0)

</stderr_txt>
]]>


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