Task 97017094

Name ebola_RdRp_v1_sidock_00046887_r1_s-24.0_0
Workunit 67729561
Created 2 Nov 2025, 11:03:03 UTC
Sent 3 Nov 2025, 17:21:50 UTC
Report deadline 7 Nov 2025, 17:21:50 UTC
Received 6 Nov 2025, 1:37:43 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79293
Run time 14 hours 23 min 35 sec
CPU time 13 hours 46 min 51 sec
Validate state Valid
Credit 805.10
Device peak FLOPS 7.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 239.59 MB
Peak swap size 245.86 MB
Peak disk usage 20.32 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
10:09:51 (26742): wrapper (7.17.26016): starting
10:09:51 (26742): wrapper (7.17.26016): starting
10:09:51 (26742): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5642f6c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fe499df2050]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x1a)[0x7fe499e4eefa]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5642f6c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5642f6c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7fe499df2050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7fe499e85545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7fe499e89e53]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3a)[0x7fe499e89d8a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x5642f6c51a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5642f6c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7fe499ddd24a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7fe499ddd305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5642f6c1aa3a]

Exiting...
07:21:40 (2945): wrapper (7.17.26016): starting
07:21:40 (2945): wrapper (7.17.26016): starting
07:21:40 (2945): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:28:05 (14282): wrapper (7.17.26016): starting
13:28:05 (14282): wrapper (7.17.26016): starting
13:28:05 (14282): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:37:32 (14282): cmdock exited; CPU time 14490.627609
17:37:32 (14282): called boinc_finish(0)

</stderr_txt>
]]>


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