Task 97017062

Name ebola_RdRp_v1_sidock_00046879_r1_s-24.0_0
Workunit 67729529
Created 2 Nov 2025, 11:03:01 UTC
Sent 3 Nov 2025, 17:05:06 UTC
Report deadline 7 Nov 2025, 17:05:06 UTC
Received 6 Nov 2025, 1:33:16 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 79293
Run time 14 hours 33 min 51 sec
CPU time 13 hours 57 min
Validate state Valid
Credit 813.73
Device peak FLOPS 7.09 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.88 MB
Peak swap size 247.02 MB
Peak disk usage 20.31 MB

Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
09:57:15 (26273): wrapper (7.17.26016): starting
09:57:15 (26273): wrapper (7.17.26016): starting
09:57:15 (26273): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x555c46c3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7efeb44c9050]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x1a)[0x7efeb4525efa]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x555c46c5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x555c46c7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c050)[0x7efeb44c9050]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0x65)[0x7efeb455c545]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x13)[0x7efeb4560e53]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x45)[0x7efeb458c285]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x555c46c51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x555c46c1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2724a)[0x7efeb44b424a]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x85)[0x7efeb44b4305]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x555c46c1aa3a]

Exiting...
07:21:40 (2944): wrapper (7.17.26016): starting
07:21:40 (2944): wrapper (7.17.26016): starting
07:21:40 (2944): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
13:28:05 (14281): wrapper (7.17.26016): starting
13:28:05 (14281): wrapper (7.17.26016): starting
13:28:05 (14281): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/4/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:33:01 (14281): cmdock exited; CPU time 14248.100222
17:33:01 (14281): called boinc_finish(0)

</stderr_txt>
]]>


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