Task 96983686

Name	ebola_RdRp_v1_sidock_00021751_r1_s-24.0_1
Workunit	67629017
Created	30 Oct 2025, 21:32:58 UTC
Sent	2 Nov 2025, 5:27:25 UTC
Report deadline	6 Nov 2025, 5:27:25 UTC
Received	5 Nov 2025, 2:53:17 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	77853
Run time	1 days 0 hours 48 min 2 sec
CPU time	1 days 0 hours 48 min 2 sec
Validate state	Valid
Credit	439.98
Device peak FLOPS	5.19 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	232.00 MB
Peak swap size	245.95 MB
Peak disk usage	19.83 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:37:26 (2217526): wrapper (7.17.26016): starting
02:37:26 (2217526): wrapper (7.17.26016): starting
02:37:26 (2217526): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/50/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): double free detected in tcache 2
SIGABRT: abort called
Stack trace (21 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c9e2303ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7da6c5845330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7da6c589eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7da6c584527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7da6c58288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x7da6c58297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x7da6c58a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab55f)[0x7da6c58ab55f]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x7da6c58addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7cd7d)[0x5c9e2307cd7d]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c31e)[0x5c9e2305c31e]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c9e2307b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7da6c5845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7da6c58ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7da6c58f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7da6c592975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c9e23051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c9e2301e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7da6c582a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7da6c582a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c9e2301aa3a]

Exiting...
19:20:34 (5151): wrapper (7.17.26016): starting
19:20:35 (5151): wrapper (7.17.26016): starting
19:20:35 (5151): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/50/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x60cf9403ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71eafea45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x71eafeaadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c35a)[0x60cf9405c35a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x60cf9407b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x71eafea45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x71eafeaecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x71eafeaf9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x71eafeb2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x60cf94051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x60cf9401e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x71eafea2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x71eafea2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x60cf9401aa3a]

Exiting...
19:41:20 (5106): wrapper (7.17.26016): starting
19:41:20 (5106): wrapper (7.17.26016): starting
19:41:20 (5106): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/50/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:53:06 (5106): cmdock exited; CPU time 29387.555004
03:53:06 (5106): called boinc_finish(0)

</stderr_txt>
]]>