Task 96980636

Name ebola_RdRp_v1_sidock_00039857_r2_s-24.0_0
Workunit 67701442
Created 29 Oct 2025, 10:38:14 UTC
Sent 2 Nov 2025, 2:22:28 UTC
Report deadline 6 Nov 2025, 2:22:28 UTC
Received 5 Nov 2025, 8:52:16 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 46694
Run time 9 hours 19 min 24 sec
CPU time 9 hours 18 min 57 sec
Validate state Valid
Credit 533.46
Device peak FLOPS 6.81 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 240.88 MB
Peak swap size 246.76 MB
Peak disk usage 20.13 MB

Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
00:44:04 (2000): wrapper (7.17.26016): starting
00:44:04 (2000): wrapper (7.17.26016): starting
00:44:04 (2000): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (12 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x557c4d064f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x12730)[0x7fab1f36e730]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x1d)[0x7fab1f220b7d]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x557c4d0813dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x557c4d0a08e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x37970)[0x7fab1f1d3970]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x40)[0x7fab1f2625c0]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x44)[0x7fab1f28d414]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x557c4d076adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x557c4d043784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xeb)[0x7fab1f1c009b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x557c4d03fa3a]

Exiting...
01:40:43 (2378): wrapper (7.17.26016): starting
01:40:43 (2378): wrapper (7.17.26016): starting
01:40:43 (2378): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/13/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:52:01 (2378): cmdock exited; CPU time 7083.742327
03:52:01 (2378): called boinc_finish(0)

</stderr_txt>
]]>


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