Task 96923867

Name ebola_RdRp_v1_sidock_00025706_r1_s-24.0_0
Workunit 67644837
Created 29 Oct 2025, 9:51:53 UTC
Sent 30 Oct 2025, 12:41:45 UTC
Report deadline 3 Nov 2025, 12:41:45 UTC
Received 6 Nov 2025, 13:57:27 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 60074
Run time 6 min 33 sec
CPU time 6 min 16 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.46 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 236.35 MB
Peak swap size 243.36 MB
Peak disk usage 19.72 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:41:50 (33399): wrapper (7.17.26016): starting
13:41:50 (33399): wrapper (7.17.26016): starting
13:41:50 (33399): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5ebaeae3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7292d2a45330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7292d2aadd55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5ebaeae5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5ebaeae7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7292d2a45330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7292d2aecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7292d2af9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7292d2b2975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5ebaeae51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5ebaeae1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7292d2a2a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7292d2a2a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5ebaeae1aa3a]

Exiting...
13:46:53 (3610): wrapper (7.17.26016): starting
13:46:53 (3610): wrapper (7.17.26016): starting
13:46:53 (3610): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5c80d883ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x776a0d845330]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x776a0d8add55]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5c80d885c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5c80d887b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x776a0d845330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x776a0d8ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x776a0d8f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x776a0d92975c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5c80d8851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5c80d881e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x776a0d82a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x776a0d82a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5c80d881aa3a]

Exiting...
14:56:13 (8137): wrapper (7.17.26016): starting
14:56:13 (8137): wrapper (7.17.26016): starting
14:56:13 (8137): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
14:57:09 (8137): cmdock exited; CPU time 51.621423
14:57:09 (8137): called boinc_finish(0)

</stderr_txt>
]]>


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