Task 96346562

Name corona_Sprot_delta_v1_RM_sidock_01891410_r4_s1000.0_0
Workunit 67109852
Created 18 Mar 2025, 5:44:42 UTC
Sent 18 Mar 2025, 14:37:42 UTC
Report deadline 21 Mar 2025, 14:37:42 UTC
Received 18 Mar 2025, 17:17:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 69838
Run time 1 hours 30 min 59 sec
CPU time 1 hours 27 min 54 sec
Validate state Valid
Credit 79.79
Device peak FLOPS 10.18 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.29 MB
Peak swap size 142.90 MB
Peak disk usage 24.17 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:41:07 (416743): wrapper (7.17.26016): starting
17:41:07 (416743): wrapper (7.17.26016): starting
17:41:07 (416743): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x562e6343ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x74d07b245330]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x74d07b29eb2c]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x74d07b24527e]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x74d07b2288ff]
/lib/x86_64-linux-gnu/libc.so.6(+0x297b6)[0x74d07b2297b6]
/lib/x86_64-linux-gnu/libc.so.6(+0xa8ff5)[0x74d07b2a8ff5]
/lib/x86_64-linux-gnu/libc.so.6(+0xab38c)[0x74d07b2ab38c]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x7e)[0x74d07b2addae]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x562e6345c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x562e6347b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x74d07b245330]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x74d07b2ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x74d07b2f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x74d07b32972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x562e63451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x562e6341e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x74d07b22a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x74d07b22a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x562e6341aa3a]

Exiting...
18:11:43 (421390): wrapper (7.17.26016): starting
18:11:43 (421390): wrapper (7.17.26016): starting
18:11:43 (421390): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/10/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
20:17:22 (421390): cmdock exited; CPU time 3499.908110
20:17:22 (421390): called boinc_finish(0)

</stderr_txt>
]]>


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