Task 95795401

Name corona_Sprot_delta_v1_RM_sidock_01764909_r3_s1000.0_0
Workunit 66603847
Created 11 Mar 2025, 21:59:22 UTC
Sent 12 Mar 2025, 6:47:47 UTC
Report deadline 15 Mar 2025, 6:47:47 UTC
Received 13 Mar 2025, 2:45:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54583
Run time 1 hours 36 min 35 sec
CPU time 1 hours 36 min 35 sec
Validate state Valid
Credit 86.49
Device peak FLOPS 8.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.11 MB
Peak swap size 142.61 MB
Peak disk usage 23.71 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:28:38 (35980): wrapper (7.17.26016): starting
02:28:38 (35980): wrapper (7.17.26016): starting
02:28:38 (35980): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (20 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x582d0a23ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x776ea1442520]
/lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x776ea14969fc]
/lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x776ea1442476]
/lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x776ea14287f3]
/lib/x86_64-linux-gnu/libc.so.6(+0x89677)[0x776ea1489677]
/lib/x86_64-linux-gnu/libc.so.6(+0xa0cfc)[0x776ea14a0cfc]
/lib/x86_64-linux-gnu/libc.so.6(+0xa2a44)[0x776ea14a2a44]
/lib/x86_64-linux-gnu/libc.so.6(free+0x73)[0x776ea14a5453]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x582d0a25c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x582d0a27b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x776ea1442520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x776ea14e57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x776ea14ea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x776ea151bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x582d0a251adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x582d0a21e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x776ea1429d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x776ea1429e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x582d0a21aa3a]

Exiting...
21:02:02 (60802): wrapper (7.17.26016): starting
21:02:02 (60802): wrapper (7.17.26016): starting
21:02:02 (60802): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:18:45 (1346): wrapper (7.17.26016): starting
21:18:45 (1346): wrapper (7.17.26016): starting
21:18:45 (1346): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:45:08 (1346): cmdock exited; CPU time 1582.702937
21:45:08 (1346): called boinc_finish(0)

</stderr_txt>
]]>


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