Task 95795388

Name corona_Sprot_delta_v1_RM_sidock_01764903_r4_s1000.0_0
Workunit 66603824
Created 11 Mar 2025, 21:59:22 UTC
Sent 12 Mar 2025, 6:47:47 UTC
Report deadline 15 Mar 2025, 6:47:47 UTC
Received 13 Mar 2025, 5:22:29 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 54583
Run time 1 hours 37 min 25 sec
CPU time 1 hours 37 min 19 sec
Validate state Valid
Credit 90.88
Device peak FLOPS 8.13 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.20 MB
Peak swap size 143.08 MB
Peak disk usage 23.54 MB

Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
21:09:04 (60957): wrapper (7.17.26016): starting
21:09:04 (60957): wrapper (7.17.26016): starting
21:09:04 (60957): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
21:29:56 (1531): wrapper (7.17.26016): starting
21:29:56 (1531): wrapper (7.17.26016): starting
21:29:56 (1531): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x62f514a3ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7b0649c42520]
/lib/x86_64-linux-gnu/libc.so.6(free+0x1e)[0x7b0649ca53fe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x62f514a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x62f514a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7b0649c42520]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xc8)[0x7b0649ce57f8]
/lib/x86_64-linux-gnu/libc.so.6(__nanosleep+0x17)[0x7b0649cea677]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7b0649d1bf2f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x62f514a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x62f514a1e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7b0649c29d90]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7b0649c29e40]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x62f514a1aa3a]

Exiting...
23:22:36 (1463): wrapper (7.17.26016): starting
23:22:36 (1463): wrapper (7.17.26016): starting
23:22:36 (1463): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/8/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:22:17 (1463): cmdock exited; CPU time 3579.237220
00:22:17 (1463): called boinc_finish(0)

</stderr_txt>
]]>


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