Task 91872405

Name corona_Sprot_delta_v1_RM_sidock_00849990_r3_s1000.0_0
Workunit 62944167
Created 29 Jan 2025, 21:26:04 UTC
Sent 30 Jan 2025, 8:47:51 UTC
Report deadline 2 Feb 2025, 8:47:51 UTC
Received 30 Jan 2025, 16:00:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 2 hours 4 min 40 sec
CPU time 2 hours 4 min 36 sec
Validate state Valid
Credit 70.59
Device peak FLOPS 5.69 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.52 MB
Peak swap size 142.62 MB
Peak disk usage 23.20 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
11:47:56 (3642): wrapper (7.17.26016): starting
11:47:56 (3642): wrapper (7.17.26016): starting
11:47:56 (3642): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x558bf4a3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f6c78974420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f6c788086f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x558bf4a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x558bf4a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f6c787b1090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f6c7884b23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f6c78850ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f6c78883a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x558bf4a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x558bf4a1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f6c78792083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x558bf4a1aa3a]

Exiting...
16:23:38 (1914): wrapper (7.17.26016): starting
16:23:38 (1914): wrapper (7.17.26016): starting
16:23:38 (1914): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/3/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
18:59:59 (1914): cmdock exited; CPU time 7032.017746
18:59:59 (1914): called boinc_finish(0)

</stderr_txt>
]]>


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