Task 91806346

Name corona_Sprot_delta_v1_RM_sidock_00834012_r1_s1000.0_0
Workunit 62880253
Created 29 Jan 2025, 16:06:48 UTC
Sent 29 Jan 2025, 19:30:57 UTC
Report deadline 1 Feb 2025, 19:30:57 UTC
Received 30 Jan 2025, 14:51:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 2 hours 11 min 29 sec
CPU time 2 hours 11 min 14 sec
Validate state Valid
Credit 76.54
Device peak FLOPS 5.69 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.59 MB
Peak swap size 142.74 MB
Peak disk usage 23.20 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:31:52 (13862): wrapper (7.17.26016): starting
22:31:52 (13862): wrapper (7.17.26016): starting
22:31:52 (13862): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55d14bc3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f0df696d420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f0df68016f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55d14bc5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55d14bc7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f0df67aa090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f0df684423f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f0df6849ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f0df687ca7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55d14bc51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55d14bc1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f0df678b083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55d14bc1aa3a]

Exiting...
11:43:10 (1944): wrapper (7.17.26016): starting
11:43:11 (1944): wrapper (7.17.26016): starting
11:43:11 (1944): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56029483ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f319a343420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f319a1d76f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56029485c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56029487b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f319a180090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f319a21a23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f319a21fec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f319a252a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x560294851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56029481e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f319a161083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56029481aa3a]

Exiting...
16:23:38 (1913): wrapper (7.17.26016): starting
16:23:38 (1913): wrapper (7.17.26016): starting
16:23:38 (1913): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:51:37 (1913): cmdock exited; CPU time 3955.026119
17:51:37 (1913): called boinc_finish(0)

</stderr_txt>
]]>


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