Task 91805563

Name corona_Sprot_delta_v1_RM_sidock_00833802_r4_s1000.0_0
Workunit 62879416
Created 29 Jan 2025, 16:05:56 UTC
Sent 29 Jan 2025, 19:19:44 UTC
Report deadline 1 Feb 2025, 19:19:44 UTC
Received 30 Jan 2025, 14:18:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 1 hours 54 min 54 sec
CPU time 1 hours 54 min 54 sec
Validate state Valid
Credit 67.28
Device peak FLOPS 5.69 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.20 MB
Peak swap size 142.48 MB
Peak disk usage 23.19 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:20:19 (13584): wrapper (7.17.26016): starting
22:20:19 (13584): wrapper (7.17.26016): starting
22:20:19 (13584): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5574cd43ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f7c15eed420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f7c15d816f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5574cd45c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5574cd47b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f7c15d2a090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f7c15dc423f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f7c15dc9ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f7c15dfca7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5574cd451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5574cd41e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f7c15d0b083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5574cd41aa3a]

Exiting...
11:43:10 (1943): wrapper (7.17.26016): starting
11:43:11 (1943): wrapper (7.17.26016): starting
11:43:11 (1943): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55dc6fa3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7ff0fc326420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7ff0fc1ba6f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55dc6fa5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55dc6fa7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7ff0fc163090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7ff0fc1fd23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7ff0fc202ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7ff0fc235a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55dc6fa51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55dc6fa1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7ff0fc144083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55dc6fa1aa3a]

Exiting...
16:23:38 (1912): wrapper (7.17.26016): starting
16:23:38 (1912): wrapper (7.17.26016): starting
16:23:38 (1912): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:18:03 (1912): cmdock exited; CPU time 2439.403418
17:18:03 (1912): called boinc_finish(0)

</stderr_txt>
]]>


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