Task 91803636

Name corona_Sprot_delta_v1_RM_sidock_00833321_r1_s1000.0_0
Workunit 62877489
Created 29 Jan 2025, 16:03:49 UTC
Sent 29 Jan 2025, 18:58:31 UTC
Report deadline 1 Feb 2025, 18:58:31 UTC
Received 30 Jan 2025, 14:16:04 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 2 hours 9 min 11 sec
CPU time 2 hours 8 min 53 sec
Validate state Valid
Credit 75.79
Device peak FLOPS 5.69 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.24 MB
Peak swap size 142.45 MB
Peak disk usage 23.26 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:59:27 (13326): wrapper (7.17.26016): starting
21:59:27 (13326): wrapper (7.17.26016): starting
21:59:27 (13326): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x555c7443ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fa3b155e420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fa3b13f26f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x555c7445c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x555c7447b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fa3b139b090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fa3b143523f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fa3b143aec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fa3b146da7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x555c74451adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x555c7441e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fa3b137c083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x555c7441aa3a]

Exiting...
11:43:10 (1941): wrapper (7.17.26016): starting
11:43:11 (1941): wrapper (7.17.26016): starting
11:43:11 (1941): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x557c5443ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f68fba2d420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7f68fb8c16f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x557c5445c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x557c5447b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f68fb86a090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f68fb90423f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f68fb909ec7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7f68fb909dfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x557c54451a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x557c5441e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f68fb84b083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x557c5441aa3a]

Exiting...
16:23:38 (1910): wrapper (7.17.26016): starting
16:23:38 (1910): wrapper (7.17.26016): starting
16:23:38 (1910): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/2/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:15:50 (1910): cmdock exited; CPU time 2346.359191
17:15:50 (1910): called boinc_finish(0)

</stderr_txt>
]]>


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