Task 91797964

Name corona_Sprot_delta_v1_RM_sidock_00831913_r1_s1000.0_0
Workunit 62871857
Created 29 Jan 2025, 15:57:35 UTC
Sent 29 Jan 2025, 17:58:53 UTC
Report deadline 1 Feb 2025, 17:58:53 UTC
Received 30 Jan 2025, 8:49:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40324
Run time 2 hours 8 min 46 sec
CPU time 2 hours 8 min 24 sec
Validate state Valid
Credit 73.93
Device peak FLOPS 5.69 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 136.71 MB
Peak swap size 142.71 MB
Peak disk usage 23.20 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
20:58:58 (11697): wrapper (7.17.26016): starting
20:58:58 (11697): wrapper (7.17.26016): starting
20:58:58 (11697): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (13 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5627e583ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fbc1ba39420]
/lib/x86_64-linux-gnu/libc.so.6(cfree+0x20)[0x7fbc1b8cd6f0]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5627e585c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5627e587b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fbc1b876090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fbc1b91023f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fbc1b915ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fbc1b948a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5627e5851adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5627e581e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fbc1b857083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5627e581aa3a]

Exiting...
11:43:10 (1939): wrapper (7.17.26016): starting
11:43:11 (1939): wrapper (7.17.26016): starting
11:43:11 (1939): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/5/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:49:01 (1939): cmdock exited; CPU time 261.813003
11:49:01 (1939): called boinc_finish(0)

</stderr_txt>
]]>


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