Task 87034190

Name ebola_GP_v1_sidock_00948355_r3_s-20.0_1
Workunit 58058688
Created 31 Oct 2024, 9:43:45 UTC
Sent 31 Oct 2024, 13:57:14 UTC
Report deadline 2 Nov 2024, 13:57:14 UTC
Received 1 Nov 2024, 5:38:34 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 39518
Run time 2 hours 51 min 36 sec
CPU time 2 hours 41 min 17 sec
Validate state Valid
Credit 68.00
Device peak FLOPS 3.71 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 97.30 MB
Peak swap size 103.30 MB
Peak disk usage 16.89 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:04:50 (6331): wrapper (7.17.26016): starting
22:04:50 (6331): wrapper (7.17.26016): starting
22:04:50 (6331): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5589e8a3ff8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f975c821420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f975c65e00b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f975c63d859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f975c6a826e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f975c6b02fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f975c6b1b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5589e8a5c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5589e8a7b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f975c65e090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f975c6f823f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f975c6fdec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f975c730a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5589e8a51adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5589e8a1e784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f975c63f083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5589e8a1aa3a]

Exiting...
23:41:47 (1551): wrapper (7.17.26016): starting
23:41:47 (1551): wrapper (7.17.26016): starting
23:41:47 (1551): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/7/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:58:55 (1551): cmdock exited; CPU time 4489.912882
00:58:55 (1551): called boinc_finish(0)

</stderr_txt>
]]>


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