Task 84816750

Name ebola_GP_v1_sidock_00406460_r2_s-20.0_1
Workunit 55831107
Created 5 Oct 2024, 11:22:25 UTC
Sent 5 Oct 2024, 12:38:27 UTC
Report deadline 7 Oct 2024, 12:38:27 UTC
Received 5 Oct 2024, 22:29:38 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 61369
Run time 1 hours 54 min 14 sec
CPU time 1 hours 53 min 12 sec
Validate state Valid
Credit 121.40
Device peak FLOPS 2.59 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 97.42 MB
Peak swap size 104.50 MB
Peak disk usage 16.85 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
10:26:25 (28378): wrapper (7.17.26016): starting
10:26:25 (28378): wrapper (7.17.26016): starting
10:26:25 (28378): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5e792e63ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x762554845320]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7625548add45]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5e792e65c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5e792e67b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x762554845320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7625548ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7625548f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x76255492972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5e792e651adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5e792e61e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x76255482a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x76255482a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5e792e61aa3a]

Exiting...
17:12:05 (2158): wrapper (7.17.26016): starting
17:12:05 (2158): wrapper (7.17.26016): starting
17:12:05 (2158): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/0/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
17:29:04 (2158): cmdock exited; CPU time 505.672751
17:29:04 (2158): called boinc_finish(0)

</stderr_txt>
]]>


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