Task 84726422

Name	ebola_GP_v1_sidock_00438042_r3_s-20.0_0
Workunit	55957436
Created	4 Oct 2024, 1:36:24 UTC
Sent	4 Oct 2024, 17:20:21 UTC
Report deadline	6 Oct 2024, 17:20:21 UTC
Received	5 Oct 2024, 1:49:07 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	61401
Run time	1 hours 46 min 47 sec
CPU time	1 hours 44 min 46 sec
Validate state	Valid
Credit	68.22
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	98.06 MB
Peak swap size	104.18 MB
Peak disk usage	16.84 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:31 (9694): wrapper (7.17.26016): starting
19:20:31 (9694): wrapper (7.17.26016): starting
19:20:31 (9694): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/49/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:09:44 (5666): wrapper (7.17.26016): starting
22:09:45 (5666): wrapper (7.17.26016): starting
22:09:45 (5666): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/49/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55f078022f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f0568a56420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f056889300b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f0568872859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f05688dd26e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f05688e52fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f05688e6b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55f07803f3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55f07805e8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f0568893090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f056892d23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f0568932ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f0568965a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55f078034adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55f078001784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f0568874083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55f077ffda3a]

Exiting...
22:13:30 (4566): wrapper (7.17.26016): starting
22:13:30 (4566): wrapper (7.17.26016): starting
22:13:30 (4566): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/49/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:48:24 (5892): wrapper (7.17.26016): starting
00:48:24 (5892): wrapper (7.17.26016): starting
00:48:24 (5892): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/49/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x564bdfa07f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f25adefb420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f25add3800b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f25add17859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f25add8226e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f25add8a2fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f25add8bb2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x564bdfa243dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x564bdfa438e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f25add38090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f25addd223f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f25addd7ec7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7f25addd7dfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x564bdfa19a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x564bdf9e6784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f25add19083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x564bdf9e2a3a]

Exiting...
22:58:48 (5922): wrapper (7.17.26016): starting
22:58:48 (5922): wrapper (7.17.26016): starting
22:58:48 (5922): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/49/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:37:26 (440055): wrapper (7.17.26016): starting
01:37:27 (440055): wrapper (7.17.26016): starting
01:37:27 (440055): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/49/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:54:15 (440055): cmdock exited; CPU time 2500.906577
02:54:15 (440055): called boinc_finish(0)

</stderr_txt>
]]>