Task 84726406

Name	ebola_GP_v1_sidock_00438039_r1_s-20.0_0
Workunit	55957422
Created	4 Oct 2024, 1:36:24 UTC
Sent	4 Oct 2024, 17:20:21 UTC
Report deadline	6 Oct 2024, 17:20:21 UTC
Received	5 Oct 2024, 0:47:26 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	61401
Run time	1 hours 41 min 26 sec
CPU time	1 hours 39 min 15 sec
Validate state	Valid
Credit	64.73
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	97.89 MB
Peak swap size	104.05 MB
Peak disk usage	16.81 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:35 (9724): wrapper (7.17.26016): starting
19:20:36 (9724): wrapper (7.17.26016): starting
19:20:36 (9724): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/58/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:09:44 (5686): wrapper (7.17.26016): starting
22:09:45 (5686): wrapper (7.17.26016): starting
22:09:45 (5686): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/58/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (19 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x559a5e417f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f308ee19420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f308ec5600b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f308ec35859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f308eca026e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f308eca82fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f308eca9b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x559a5e4343dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x559a5e4538e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f308ec56090]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x559a5e412ec0]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f308ee19420]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f308ecf023f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f308ecf5ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f308ed28a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x559a5e429adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x559a5e3f6784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f308ec37083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x559a5e3f2a3a]

Exiting...
22:13:30 (4575): wrapper (7.17.26016): starting
22:13:30 (4575): wrapper (7.17.26016): starting
22:13:30 (4575): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/58/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:48:24 (5911): wrapper (7.17.26016): starting
00:48:24 (5911): wrapper (7.17.26016): starting
00:48:24 (5911): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/58/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55c399c3cf8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f2132e81420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f2132cbe00b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f2132c9d859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f2132d0826e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f2132d102fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f2132d11b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55c399c593dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55c399c788e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f2132cbe090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f2132d5823f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f2132d5dec7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7f2132d5ddfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x55c399c4ea9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55c399c1b784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f2132c9f083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55c399c17a3a]

Exiting...
22:58:48 (5968): wrapper (7.17.26016): starting
22:58:48 (5968): wrapper (7.17.26016): starting
22:58:48 (5968): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/58/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:37:26 (440063): wrapper (7.17.26016): starting
01:37:27 (440063): wrapper (7.17.26016): starting
01:37:27 (440063): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/58/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:46:11 (440063): cmdock exited; CPU time 2264.033367
02:46:11 (440063): called boinc_finish(0)

</stderr_txt>
]]>