Task 84726387

Name	ebola_GP_v1_sidock_00438037_r4_s-20.0_0
Workunit	55957417
Created	4 Oct 2024, 1:36:23 UTC
Sent	4 Oct 2024, 17:20:21 UTC
Report deadline	6 Oct 2024, 17:20:21 UTC
Received	5 Oct 2024, 1:49:07 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	61401
Run time	1 hours 44 min 9 sec
CPU time	1 hours 41 min 54 sec
Validate state	Valid
Credit	66.78
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	98.22 MB
Peak swap size	104.24 MB
Peak disk usage	16.80 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:31 (9692): wrapper (7.17.26016): starting
19:20:31 (9692): wrapper (7.17.26016): starting
19:20:31 (9692): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/47/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:09:44 (5664): wrapper (7.17.26016): starting
22:09:45 (5664): wrapper (7.17.26016): starting
22:09:45 (5664): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/47/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55d208f40f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f4ae3f21420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f4ae3d5e00b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f4ae3d3d859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f4ae3da826e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f4ae3db02fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f4ae3db1b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55d208f5d3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55d208f7c8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f4ae3d5e090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f4ae3df823f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f4ae3dfdec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f4ae3e30a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55d208f52adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55d208f1f784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f4ae3d3f083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55d208f1ba3a]

Exiting...
22:13:30 (4564): wrapper (7.17.26016): starting
22:13:30 (4564): wrapper (7.17.26016): starting
22:13:30 (4564): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/47/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:48:24 (5890): wrapper (7.17.26016): starting
00:48:24 (5890): wrapper (7.17.26016): starting
00:48:24 (5890): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/47/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x556d5b6b8f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f1a28aea420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f1a2892700b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f1a28906859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f1a2897126e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f1a289792fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f1a2897ab2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x556d5b6d53dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x556d5b6f48e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f1a28927090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f1a289c123f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f1a289c6ec7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7f1a289c6dfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x556d5b6caa9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x556d5b697784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f1a28908083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x556d5b693a3a]

Exiting...
22:58:48 (5920): wrapper (7.17.26016): starting
22:58:48 (5920): wrapper (7.17.26016): starting
22:58:48 (5920): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/47/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:37:26 (440053): wrapper (7.17.26016): starting
01:37:27 (440053): wrapper (7.17.26016): starting
01:37:27 (440053): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/47/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:50:26 (440053): cmdock exited; CPU time 2398.735908
02:50:26 (440053): called boinc_finish(0)

</stderr_txt>
]]>