Task 84726383

Name	ebola_GP_v1_sidock_00438036_r4_s-20.0_0
Workunit	55957413
Created	4 Oct 2024, 1:36:23 UTC
Sent	4 Oct 2024, 17:20:22 UTC
Report deadline	6 Oct 2024, 17:20:22 UTC
Received	5 Oct 2024, 1:49:07 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	61401
Run time	1 hours 43 min 4 sec
CPU time	1 hours 41 min 14 sec
Validate state	Valid
Credit	66.03
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	97.06 MB
Peak swap size	103.30 MB
Peak disk usage	16.84 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:29 (9680): wrapper (7.17.26016): starting
19:20:29 (9680): wrapper (7.17.26016): starting
19:20:29 (9680): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/44/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:09:44 (5661): wrapper (7.17.26016): starting
22:09:45 (5661): wrapper (7.17.26016): starting
22:09:45 (5661): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/44/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55f46ee09f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f5e5ec6b420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f5e5eaa800b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f5e5ea87859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f5e5eaf226e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f5e5eafa2fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f5e5eafbb2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55f46ee263dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55f46ee458e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f5e5eaa8090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f5e5eb4223f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f5e5eb47ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f5e5eb7aa7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x55f46ee1badf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55f46ede8784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f5e5ea89083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55f46ede4a3a]

Exiting...
22:13:30 (4561): wrapper (7.17.26016): starting
22:13:30 (4561): wrapper (7.17.26016): starting
22:13:30 (4561): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/44/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:48:24 (5886): wrapper (7.17.26016): starting
00:48:24 (5886): wrapper (7.17.26016): starting
00:48:24 (5886): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/44/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (19 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x56468fa72f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f2e10d25420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f2e10b6200b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f2e10b41859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f2e10bac26e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f2e10bb42fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f2e10bb5b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x56468fa8f3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x56468faae8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f2e10b62090]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3aec0)[0x56468fa6dec0]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f2e10d25420]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f2e10bfc23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f2e10c01ec7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7f2e10c01dfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x56468fa84a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x56468fa51784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f2e10b43083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x56468fa4da3a]

Exiting...
22:58:48 (5908): wrapper (7.17.26016): starting
22:58:48 (5908): wrapper (7.17.26016): starting
22:58:48 (5908): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/44/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:37:26 (440050): wrapper (7.17.26016): starting
01:37:27 (440050): wrapper (7.17.26016): starting
01:37:27 (440050): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/44/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:48:40 (440050): cmdock exited; CPU time 2330.112660
02:48:40 (440050): called boinc_finish(0)

</stderr_txt>
]]>