Task 84726382

Name	ebola_GP_v1_sidock_00438033_r1_s-20.0_0
Workunit	55957398
Created	4 Oct 2024, 1:36:23 UTC
Sent	4 Oct 2024, 17:20:22 UTC
Report deadline	6 Oct 2024, 17:20:22 UTC
Received	5 Oct 2024, 0:47:26 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	61401
Run time	1 hours 56 min
CPU time	1 hours 54 min 18 sec
Validate state	Valid
Credit	73.99
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	97.94 MB
Peak swap size	104.23 MB
Peak disk usage	16.82 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:25 (9652): wrapper (7.17.26016): starting
19:20:25 (9652): wrapper (7.17.26016): starting
19:20:25 (9652): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/34/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:09:44 (5651): wrapper (7.17.26016): starting
22:09:45 (5651): wrapper (7.17.26016): starting
22:09:45 (5651): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/34/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5606c0635f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7f3171165420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7f3170fa200b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7f3170f81859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7f3170fec26e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7f3170ff42fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7f3170ff5b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5606c06523dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5606c06718e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7f3170fa2090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7f317103c23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7f3171041ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7f3171074a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5606c0647adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5606c0614784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7f3170f83083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5606c0610a3a]

Exiting...
22:13:30 (4551): wrapper (7.17.26016): starting
22:13:30 (4551): wrapper (7.17.26016): starting
22:13:30 (4551): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/34/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:48:24 (5876): wrapper (7.17.26016): starting
00:48:24 (5876): wrapper (7.17.26016): starting
00:48:24 (5876): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/34/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55a7ea207f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fa5c3023420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fa5c2e6000b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fa5c2e3f859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7fa5c2eaa26e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7fa5c2eb22fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7fa5c2eb3b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55a7ea2243dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55a7ea2438e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fa5c2e60090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fa5c2efa23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fa5c2effec7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7fa5c2effdfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x55a7ea219a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55a7ea1e6784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fa5c2e41083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55a7ea1e2a3a]

Exiting...
22:58:47 (5853): wrapper (7.17.26016): starting
22:58:48 (5853): wrapper (7.17.26016): starting
22:58:48 (5853): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/34/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:05:10 (438163): wrapper (7.17.26016): starting
01:05:10 (438163): wrapper (7.17.26016): starting
01:05:10 (438163): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/34/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
02:18:03 (438163): cmdock exited; CPU time 3099.255405
02:18:03 (438163): called boinc_finish(0)

</stderr_txt>
]]>