Task 84726379

Name	ebola_GP_v1_sidock_00438035_r4_s-20.0_0
Workunit	55957409
Created	4 Oct 2024, 1:36:22 UTC
Sent	4 Oct 2024, 17:20:22 UTC
Report deadline	6 Oct 2024, 17:20:22 UTC
Received	5 Oct 2024, 1:49:07 UTC
Server state	Over
Outcome	Success
Client state	Done
Exit status	0 (0x00000000)
Computer ID	61401
Run time	1 hours 45 min 57 sec
CPU time	1 hours 44 min 27 sec
Validate state	Valid
Credit	67.83
Device peak FLOPS	1.00 GFLOPS
Application version	CurieMarieDock 0.2.0 long tasks v2.02 x86_64-pc-linux-gnu
Peak working set size	97.12 MB
Peak swap size	103.31 MB
Peak disk usage	16.88 MB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:37 (9733): wrapper (7.17.26016): starting
19:20:38 (9733): wrapper (7.17.26016): starting
19:20:38 (9733): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/61/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
22:09:44 (5690): wrapper (7.17.26016): starting
22:09:45 (5690): wrapper (7.17.26016): starting
22:09:45 (5690): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/61/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x558b89ffef8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fcc3ccd4420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fcc3cb1100b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fcc3caf0859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7fcc3cb5b26e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7fcc3cb632fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7fcc3cb64b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x558b8a01b3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x558b8a03a8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fcc3cb11090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fcc3cbab23f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fcc3cbb0ec7]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4f)[0x7fcc3cbe3a7f]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x558b8a010adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x558b89fdd784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fcc3caf2083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x558b89fd9a3a]

Exiting...
22:13:30 (4578): wrapper (7.17.26016): starting
22:13:30 (4578): wrapper (7.17.26016): starting
22:13:30 (4578): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/61/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
00:48:24 (5926): wrapper (7.17.26016): starting
00:48:24 (5926): wrapper (7.17.26016): starting
00:48:24 (5926): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/61/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
free(): invalid pointer
SIGABRT: abort called
Stack trace (17 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x55a7794a6f8c]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x14420)[0x7fcc86b40420]
/lib/x86_64-linux-gnu/libc.so.6(gsignal+0xcb)[0x7fcc8697d00b]
/lib/x86_64-linux-gnu/libc.so.6(abort+0x12b)[0x7fcc8695c859]
/lib/x86_64-linux-gnu/libc.so.6(+0x8d26e)[0x7fcc869c726e]
/lib/x86_64-linux-gnu/libc.so.6(+0x952fc)[0x7fcc869cf2fc]
/lib/x86_64-linux-gnu/libc.so.6(+0x96b2c)[0x7fcc869d0b2c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x55a7794c33dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x55a7794e28e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x43090)[0x7fcc8697d090]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xdf)[0x7fcc86a1723f]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7fcc86a1cec7]
/lib/x86_64-linux-gnu/libc.so.6(sleep+0x3e)[0x7fcc86a1cdfe]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51a9a)[0x55a7794b8a9a]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x55a779485784]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xf3)[0x7fcc8695e083]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x55a779481a3a]

Exiting...
22:58:48 (5983): wrapper (7.17.26016): starting
22:58:48 (5983): wrapper (7.17.26016): starting
22:58:48 (5983): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/61/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
01:44:41 (440221): wrapper (7.17.26016): starting
01:44:41 (440221): wrapper (7.17.26016): starting
01:44:41 (440221): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/61/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:07:46 (472063): wrapper (7.17.26016): starting
03:07:46 (472063): wrapper (7.17.26016): starting
03:07:46 (472063): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc/slots/61/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
03:09:41 (472063): cmdock exited; CPU time 114.283246
03:09:41 (472063): called boinc_finish(0)

</stderr_txt>
]]>