Task 84715605

Name ebola_GP_v1_sidock_00435339_r1_s-20.0_0
Workunit 55946622
Created 4 Oct 2024, 1:26:27 UTC
Sent 4 Oct 2024, 14:53:25 UTC
Report deadline 6 Oct 2024, 14:53:25 UTC
Received 5 Oct 2024, 10:47:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 23605
Run time 1 hours 47 min 11 sec
CPU time 1 hours 46 min 25 sec
Validate state Valid
Credit 52.58
Device peak FLOPS 5.97 GFLOPS
Application version CurieMarieDock 0.2.0 long tasks v2.02
x86_64-pc-linux-gnu
Peak working set size 96.91 MB
Peak swap size 103.80 MB
Peak disk usage 16.92 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:20:30 (11086): wrapper (7.17.26016): starting
17:20:30 (11086): wrapper (7.17.26016): starting
17:20:30 (11086): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
SIGSEGV: segmentation violation
Stack trace (14 frames):
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x3ff8c)[0x5fe9f903ff8c]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7740e5045320]
/lib/x86_64-linux-gnu/libc.so.6(__libc_free+0x25)[0x7740e50add45]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x5c3dd)[0x5fe9f905c3dd]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x7b8e4)[0x5fe9f907b8e4]
/lib/x86_64-linux-gnu/libc.so.6(+0x45320)[0x7740e5045320]
/lib/x86_64-linux-gnu/libc.so.6(clock_nanosleep+0xbf)[0x7740e50ecadf]
/lib/x86_64-linux-gnu/libc.so.6(nanosleep+0x17)[0x7740e50f9a27]
/lib/x86_64-linux-gnu/libc.so.6(usleep+0x4c)[0x7740e512972c]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x51adf)[0x5fe9f9051adf]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1e784)[0x5fe9f901e784]
/lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7740e502a1ca]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7740e502a28b]
../../projects/www.sidock.si_sidock/cmdock-l_wrapper_2.02_x86_64-pc-linux-gnu(+0x1aa3a)[0x5fe9f901aa3a]

Exiting...
10:18:05 (2865): wrapper (7.17.26016): starting
10:18:06 (2865): wrapper (7.17.26016): starting
10:18:06 (2865): wrapper: running cmdock (-c -j 1 -b 1 -r target.prm -p "/var/lib/boinc-client/slots/1/data/scripts/dock.prm" -f htvs.ptc -i ligands.sdf -o docking_out)
11:49:56 (2865): cmdock exited; CPU time 3182.174008
11:49:56 (2865): called boinc_finish(0)

</stderr_txt>
]]>


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